SubtiBank SubtiBank
Version comparison:

2017-09-07 07:59:522025-04-11 16:00:25

description

elongation factor P, important for the proteins containing three or more consecutive proline residues

elongation factor P, important for the [[category|Translation]] of proteins containing three or more consecutive proline residues

locus

BSU24450

BSU_24450

geneLength

555

558

function

translation

[[category|Translation]]

outlinks

bsu

BSU24450

BSU_24450

Gene

Coordinates

2,538,115 → 2,538,672

2,538,115 2,538,672

The protein

Protein family

transpeptidase family (according to Swiss-Prot) elongation factor P family (according to Swiss-Prot)

elongation factor P family (single member, according to UniProt)

The protein

Structure

[PDB|1YBY] (Efp from ''Clostridium thermocellum'')

[PDB|6RK3] (from Staphylococcus aureus, 71% identity) [pubmed|32152681]

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot), cell membrane (according to Swiss-Prot)

cytoplasm (according to Swiss-Prot)

Biological materials

Mutant

MGNA-C464 (efp::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2462 NBRP B. subtilis, Japan]

BKE24450 (''[[gene|efp]]''::''erm'', available in the BGSC and in [SW|Jörg Stülke]'s lab) [pubmed|28189581]

MGNA-C464 (efp::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2462 NBRP B. subtilis, Japan]

BKE24450 (''[[gene|efp]]''::''erm'', available in the BGSC and in [SW|Jörg Stülke]'s lab) [pubmed|28189581]

BKE24450 ([[gene|efp]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE24450 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTAATGTCCTCCTAT, downstream forward: _UP4_TAGAAAGAAAAAAAGAAGTC

BKK24450 ([[gene|efp]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK24450 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTAATGTCCTCCTAT, downstream forward: _UP4_TAGAAAGAAAAAAAGAAGTC

References

Reviews

26416626

26416626, 28886684, 32011712

References

Original publications

15066026, 17981983, 23239624, 23239623, 25310979, 25144653, 27002156, 26735940, 27216360, 26384033, 28787546

15066026, 17981983, 23239624, 23239623, 25310979, 25144653, 27002156, 26735940, 27216360, 26384033, 28787546, 28765223, 29615499, 30297417, 32152681

The protein

Catalyzed reaction/ biological activity

see a list of [[category|Efp-dependent proteins]]

The protein

Paralogous protein(s)

[[this]]